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A264870 Triangular array: For n >= 2 and 0 < k <= n - 2, T(n, k) equals the number of (unrooted) duplication trees on n gene segments that are canonical and whose leftmost visible duplication event is (k, r), for 1 <= r <= (n - k)/2. 3

%I #9 Nov 29 2015 14:04:19

%S 1,0,1,1,1,1,2,3,3,3,5,8,11,11,11,13,24,35,46,46,46,37,72,118,164,210,

%T 210,210,109,227,391,601,811,1021,1021,1021,336,727,1328,2139,3160,

%U 4181,5202,5202,5202,1063,2391,4530,7690,11871,17073,22275,27477,27477,27477

%N Triangular array: For n >= 2 and 0 < k <= n - 2, T(n, k) equals the number of (unrooted) duplication trees on n gene segments that are canonical and whose leftmost visible duplication event is (k, r), for 1 <= r <= (n - k)/2.

%C See Figure 3(b) in Gascuel et al. (2003).

%C From row 4 onwards, the entries are one-half the corresponding entries in A264879.

%C Row sums give the number of unrooted duplication trees on n gene segments, A086521.

%D O. Gascuel (Ed.), Mathematics of Evolution and Phylogeny, Oxford University Press, 2005

%H O. Gascuel, M. Hendy, A. Jean-Marie and R. McLachlan, <a href="http://www.massey.ac.nz/~rmclachl/duplications.pdf">The combinatorics of tandem duplication trees</a>, Systematic Biology 52, 110-118, (2003).

%H J. Yang and L. Zhang, <a href="http://dx.doi.org/10.1093/molbev/msh115">On Counting Tandem Duplication Trees"</a>, Molecular Biology and Evolution, Volume 21, Issue 6, (2004) 1160-1163.

%F T(n,k) = Sum_{j = 0..k+1} T(n-1,j) for n >= 4, 0 <= k <= n - 2, with T(2,0) = T(3,1) = 1, T(3,0) = 0 and T(n,k) = 0 for k >= n - 1.

%F T(n,k) = T(n,k-1) + T(n-1,k+1) for n >= 4, 1 <= k <= n - 2.

%e Triangle begins

%e n\k| 0 1 2 3 4 5 6 7

%e ----------------------------------------------

%e .2.| 1

%e .3.| 0 1

%e .4.| 1 1 1

%e .5.| 2 3 3 3

%e .6.| 5 8 11 11 11

%e .7.| 13 24 35 46 46 46

%e .8.| 37 72 118 164 210 210 210

%e .9.| 109 227 391 601 811 1021 1021 1021

%e ...

%p A264870 := proc (n, k) option remember;

%p `if`(n = 3 and k = 0, 0, `if`(n <= 4 and k <= n-2, 1, `if`(k > n - 2, 0, add(A264870(n-1, j), j = 0..min(k+1, n))))) end proc:

%p seq(seq(A264870(n, k), k = 0..n-2), n = 2..11);

%Y Cf. A086521 (row sums), A264868, A264869.

%K nonn,tabl,easy

%O 0,7

%A _Peter Bala_, Nov 27 2015

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Last modified April 23 20:33 EDT 2024. Contains 371916 sequences. (Running on oeis4.)